Pvit_13430 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_13430 T137365_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB37
M04603_2.00
Homo sapiens
DTCGGCYAABDCGGCAN

NTGCCGHVTTRGCCGAH
SELEX
Yin et al.(2017)
ZBTB37_eDBD_HT-SELEX
0.827 1.000
ZBTB37
M04604_2.00
Homo sapiens
NHRCSRNRNHYACCRYV

BRYGGTRDNYNYSGYDN
SELEX
Yin et al.(2017)
ZBTB37_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_13430 C2H2 ZF 373 395
Pvit_13430 C2H2 ZF 401 423
Pvit_13430 C2H2 ZF 429 452

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
scaffold_701105.1 Arabidopsis lyrata scaffold_701105.1 I 0.000
ERF015 Arabidopsis thaliana AT4G31060 D 0.000
Bostr.7867s0965 Boechera stricta Bostr.7867s0965 I 0.000
Bo1g011650 Brassica oleracea Bo1g011650 I 0.000
Bra010258 Brassica rapa Bra010258 I 0.000
Bra011244 Brassica rapa Bra011244 I 0.000
Carubv10006208m.g Capsella rubella Carubv10006208m.g I 0.000
evm.TU.supercontig_91.71 Carica papaya evm.TU.supercontig_91.71 N 0.000
Thhalv10026328m.g Eutrema salsugineum Thhalv10026328m.g I 0.000