CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_14576
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_14576
T137400_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.823
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_14576
C2H2 ZF
488
513
FHCPYEGCTQVYVALSSFQNHVNLVH
Pvit_14576
C2H2 ZF
519
543
KVCPHPGCGKKFYLSNHLRRHMIIH
Pvit_14576
C2H2 ZF
549
571
FTCETCGKSFKRKNHLEVHRRTH
Pvit_14576
C2H2 ZF
577
599
LQCEICGYQCRQRASLNWHMKKH
Pvit_14576
C2H2 ZF
607
630
FTCEHCGKRFEKLDSVKFHKLKSH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy