Pvit_14576 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_14576 T137400_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD

HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.823 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_14576 C2H2 ZF 488 513
Pvit_14576 C2H2 ZF 519 543
Pvit_14576 C2H2 ZF 549 571
Pvit_14576 C2H2 ZF 577 599
Pvit_14576 C2H2 ZF 607 630

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action