Pvit_14802 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_14802 T137412_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF777
M05857_2.00
Homo sapiens
GHCCSYCCCGTCSARCAAW

WTTGYTSGACGGGRSGGDC
SMiLE-seq
Isakova et al.(2017)
ZNF777
0.759 0.821
ZNF777
M07703_2.00
Homo sapiens
CCGACGK

MCGTCGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF777.MEME.OriginalMapping
0.759 0.821
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_14802 C2H2 ZF 436 458
Pvit_14802 C2H2 ZF 464 486
Pvit_14802 C2H2 ZF 522 544
Pvit_14802 C2H2 ZF 550 572
Pvit_14802 C2H2 ZF 580 602
Pvit_14802 C2H2 ZF 608 630
Pvit_14802 C2H2 ZF 636 658
Pvit_14802 C2H2 ZF 664 686
Pvit_14802 C2H2 ZF 692 714

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.000
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N 0.000
Bo2g081100 Brassica oleracea Bo2g081100 N 0.000
Bo5g025730 Brassica oleracea Bo5g025730 N 0.000
Bo5g025790 Brassica oleracea Bo5g025790 N 0.000
Bo6g087030 Brassica oleracea Bo6g087030 N 0.000
Bo6g118710 Brassica oleracea Bo6g118710 N 0.000
Bo6g118730 Brassica oleracea Bo6g118730 N 0.000
Bo8g068030 Brassica oleracea Bo8g068030 N 0.000
Bo8g091080 Brassica oleracea Bo8g091080 N 0.000
Bo8g091100 Brassica oleracea Bo8g091100 N 0.000
Bostr.3288s0088 Boechera stricta Bostr.3288s0088 N 0.000
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.000
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N 0.000
Bra003801 Brassica rapa Bra003801 N 0.000
Bra008149 Brassica rapa Bra008149 N 0.000
Bra015911 Brassica rapa Bra015911 N 0.000
Bra016546 Brassica rapa Bra016546 N 0.000
Bra025678 Brassica rapa Bra025678 N 0.000
Cagra.4153s0008 Capsella grandiflora Cagra.4153s0008 N 0.000
Carubv10010045m.g Capsella rubella Carubv10010045m.g N 0.000
Carubv10010086m.g Capsella rubella Carubv10010086m.g N 0.000
Carubv10011014m.g Capsella rubella Carubv10011014m.g N 0.000
Carubv10014503m.g Capsella rubella Carubv10014503m.g N 0.000
Carubv10020753m.g Capsella rubella Carubv10020753m.g N 0.000
fgenesh1_pg.C_scaffold_1001692 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001692 N 0.000
MYB95 Arabidopsis lyrata fgenesh2_kg.2__1707__AT1G74430.1 N 0.000
MYB95 Arabidopsis thaliana AT1G74430 N 0.000
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N 0.000
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N 0.000