CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_15995
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_15995
T137441_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp652
M02938_2.00
Mus musculus
DTTAACCCTTTVN
NBAAAGGGTTAAH
SELEX
Jolma et al.(2013)
Zfp652_1
0.822
0.995
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_15995
C2H2 ZF
247
270
LTCEKCPRVFNTRWYLEKHMNVTH
Pvit_15995
C2H2 ZF
275
295
ICDKCGKKFVLESELSLHQQT
Pvit_15995
C2H2 ZF
301
324
IQCVSCNKSFKKLWSLHEHIKIVH
Pvit_15995
C2H2 ZF
331
353
FSCEICEKKFYTMAHVRKHMVAH
Pvit_15995
C2H2 ZF
359
381
FTCETCGKSFKRSMSLKVHSLQH
Pvit_15995
C2H2 ZF
387
409
FRCENCDERFQYKYQLRSHMSIH
Pvit_15995
C2H2 ZF
415
437
FMCQWCGKDFNMKQYFDEHMKTH
Pvit_15995
C2H2 ZF
443
465
FICEICGKSFTSRPNMKRHRRTH
Pvit_15995
C2H2 ZF
471
492
YPCDVCGQRFRFSNMLKAHKEK
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy