Pvit_16300 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_16300 T137451_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF276
M04495_2.00 		Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN		 SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX 		0.816 0.965
ZNF276
M04496_2.00 		Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS		 SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX 		0.816 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_16300 C2H2 ZF 381 406
Pvit_16300 C2H2 ZF 413 437
Pvit_16300 C2H2 ZF 443 465
Pvit_16300 C2H2 ZF 471 493
Pvit_16300 C2H2 ZF 501 524

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009185 Calypte anna Aan_R009185 I 0.827
Alligator_sinensis_CCG009047.1 Alligator sinensis Alligator_sinensis_CCG009047.1 I 0.827
Brh_R003401 Buceros rhinoceros Brh_R003401 I 0.827
ENSFALG00000003070 Ficedula albicollis ENSFALG00000003070 I 0.827
ZNF276 Taeniopygia guttata ENSTGUG00000007961 I 0.827
ENSPSIG00000009997 Pelodiscus sinensis ENSPSIG00000009997 I 0.827
ZNF276 Meleagris gallopavo ENSMGAG00000008195 I 0.827
ZNF276 Gallus gallus ENSGALG00000000513 I 0.827
Cmyd_10016754 Chelonia mydas Cmyd_10016754 I 0.827
Afo_R007523 Aptenodytes forsteri Afo_R007523 I 0.827
Gfo_R000535 Geospiza fortis Gfo_R000535 I 0.827
Ogr16798 Ophisaurus gracilis Ogr16798 I 0.827
ENSAPLG00000006256 Anas platyrhynchos ENSAPLG00000006256 I 0.827
ZNF276 Ornithorhynchus anatinus ENSOANG00000004837 I 0.826
ENSSHAG00000006045 Sarcophilus harrisii ENSSHAG00000006045 I 0.826
ENSMEUG00000001901 Macropus eugenii ENSMEUG00000001901 I 0.826
ZNF276 Monodelphis domestica ENSMODG00000003479 I 0.826
ZNF276 Anolis carolinensis ENSACAG00000008103 I 0.824
znf276.S Xenopus laevis XB-GENE-983672 I 0.822
znf276 Xenopus tropicalis XB-GENE-983669 I 0.822
ENSLOCG00000002928 Lepisosteus oculatus ENSLOCG00000002928 I 0.820
ZNF276 Procavia capensis ENSPCAG00000001610 I 0.816
ZNF276 Pan troglodytes ENSPTRG00000008487 I 0.816
ZNF276 Ochotona princeps ENSOPRG00000016172 I 0.816
ENSPANG00000022228 Papio anubis ENSPANG00000022228 I 0.816
ENSPPYG00000007673 Pongo abelii ENSPPYG00000007673 I 0.816
ENSSTOG00000013982 Ictidomys tridecemlineatus ENSSTOG00000013982 I 0.816
ENSMMUP00000003371 Macaca fascicularis ENSMMUP00000003371 I 0.816
ENSP00000415836-D1 Bos grunniens ENSP00000415836-D1 I 0.816
Myotis_brandtii_ZNF276_10003797 Myotis brandtii Myotis_brandtii_ZNF276_10003797 I 0.816
ZNF276 Tursiops truncatus ENSTTRG00000004416 I 0.816
ZNF276 Otolemur garnettii ENSOGAG00000004891 I 0.816
ZNF276 Sorex araneus ENSSARG00000003731 I 0.816
ZNF276 Sus scrofa ENSSSCG00000029228 I 0.816
Zfp276 Rattus norvegicus ENSRNOG00000016631 I 0.816
ENSOARG00000014354 Ovis aries ENSOARG00000014354 I 0.816
ZNF276 Cavia porcellus ENSCPOG00000002334 I 0.816
ZNF276 Homo sapiens ENSG00000158805 D 0.816
ZNF276 Callithrix jacchus ENSCJAG00000010721 I 0.816
ZNF276 Gorilla gorilla ENSGGOG00000010960 I 0.816
ENSCSAG00000002787 Chlorocebus sabaeus ENSCSAG00000002787 I 0.816
ZNF276 Felis catus ENSFCAG00000003794 I 0.816
ZNF276 Equus caballus ENSECAG00000019563 I 0.816
ENSEEUG00000012574 Erinaceus europaeus ENSEEUG00000012574 I 0.816
ZNF276 Dasypus novemcinctus ENSDNOG00000001856 I 0.816
ZNF276 Canis familiaris ENSCAFG00000019816 I 0.816
ZNF276 Loxodonta africana ENSLAFG00000018198 I 0.816
Zfp276 Mus musculus ENSMUSG00000001065 I 0.816
ENSNLEG00000015731 Nomascus leucogenys ENSNLEG00000015731 I 0.816
ENSAMEG00000001273 Ailuropoda melanoleuca ENSAMEG00000001273 I 0.816
ZNF276 Oryctolagus cuniculus ENSOCUG00000008960 I 0.816
ENSDORG00000012257 Dipodomys ordii ENSDORG00000012257 I 0.816
ZNF276 Bos taurus ENSBTAG00000001904 I 0.816
ZNF276 Myotis lucifugus ENSMLUG00000013641 I 0.816
ENSMPUG00000007237 Mustela putorius furo ENSMPUG00000007237 I 0.816
ZNF276 Macaca mulatta ENSMMUG00000002506 I 0.816
ZNF276 Microcebus murinus ENSMICG00000003291 I 0.816
ENSETEG00000007978 Echinops telfairi ENSETEG00000007978 I 0.815
ZNF276 Tetraodon nigroviridis ENSTNIG00000008839 I 0.805
ENSGMOG00000003784 Gadus morhua ENSGMOG00000003784 I 0.805
ZNF276 Gasterosteus aculeatus ENSGACG00000002104 I 0.805
ZNF276 Takifugu rubripes ENSTRUG00000005087 I 0.805
ZNF276 Oryzias latipes ENSORLG00000015289 I 0.795
ENSONIG00000010959 Oreochromis niloticus ENSONIG00000010959 I 0.795
ENSAMXG00000015046 Astyanax mexicanus ENSAMXG00000015046 I 0.788
ENSPFOG00000011742 Poecilia formosa ENSPFOG00000011742 I 0.784
ENSXMAG00000002903 Xiphophorus maculatus ENSXMAG00000002903 I 0.784