Pvit_16613 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_16613 T137461_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF385D
M04481_2.00 		Homo sapiens
HYGTCGCGACDD
HHGTCGCGACRD		 SELEX
Yin et al.(2017)
ZNF385D_eDBD_HT-SELEX 		0.827 1.000
ZNF385D
M04482_2.00 		Homo sapiens
HCGTCGCGACGD
HCGTCGCGACGD		 SELEX
Yin et al.(2017)
ZNF385D_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_16613 C2H2 ZF 264 288

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

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33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action