Pvit_19180 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_19180 T137551_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.817 0.982
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.817 0.982
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.817 0.982
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.817 0.982
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.817 0.982
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.817 0.982
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.817 0.982
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.817 0.982
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.817 0.982
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.812 0.969
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.812 0.969
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_19180 C2H2 ZF 198 219
Pvit_19180 C2H2 ZF 252 274
Pvit_19180 C2H2 ZF 280 302
Pvit_19180 C2H2 ZF 308 331
Pvit_19180 C2H2 ZF 337 359
Pvit_19180 C2H2 ZF 365 387
Pvit_19180 C2H2 ZF 394 415
Pvit_19180 C2H2 ZF 903 925
Pvit_19180 C2H2 ZF 931 954
Pvit_19180 C2H2 ZF 960 982

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action