Pvit_19180 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_19180 T137551_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MECOM
M08862_2.00
Homo sapiens
HNTNTTATCTTRTCWN

NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B
0.817 0.982
MECOM
M10125_2.00
Homo sapiens
TTATCTTATCTTRTCW

WGAYAAGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_01
0.817 0.982
MECOM
M10126_2.00
Homo sapiens
TTATCTTRTCH

DGAYAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_02
0.817 0.982
MECOM
M10127_2.00
Homo sapiens
TTATCTTATCT

AGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_03
0.817 0.982
MECOM
M10128_2.00
Homo sapiens
TAWYYWDWYHTATYH

DRATADRAHWRRAWA
Transfac
Matys et al.(2006)
V$EVI1_04
0.817 0.982
MECOM
M10129_2.00
Homo sapiens
HTATCTTATCT

AGATAAGATAD
Transfac
Matys et al.(2006)
V$EVI1_05
0.817 0.982
MECOM
M10130_2.00
Homo sapiens
TTATCTTGT

ACAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_06
0.817 0.982
MECOM
M10131_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI1_Q3
0.817 0.982
MECOM
M10132_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI_Q6
0.817 0.982
Mecom
M02667_2.00
Mus musculus
KNTTATCTTRTCTH

DAGAYAAGATAANM
SELEX
Mathelier et al.(2014)
MA0029.1
0.812 0.969
Mecom
M08980_2.00
Mus musculus
HNTNTTATCTTRTCWN

NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B
0.812 0.969
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_19180 C2H2 ZF 198 219
Pvit_19180 C2H2 ZF 252 274
Pvit_19180 C2H2 ZF 280 302
Pvit_19180 C2H2 ZF 308 331
Pvit_19180 C2H2 ZF 337 359
Pvit_19180 C2H2 ZF 365 387
Pvit_19180 C2H2 ZF 394 415
Pvit_19180 C2H2 ZF 903 925
Pvit_19180 C2H2 ZF 931 954
Pvit_19180 C2H2 ZF 960 982

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000010499 Ailuropoda melanoleuca ENSAMEG00000010499 I 0.000
Alligator_sinensis_CCG008027.1 Alligator sinensis Alligator_sinensis_CCG008027.1 I 0.000
MAFF Anolis carolinensis ENSACAG00000008424 I 0.000
Afo_R007908 Aptenodytes forsteri Afo_R007908 I 0.000
ENSAMXG00000008651 Astyanax mexicanus ENSAMXG00000008651 I 0.000
ENSBTAP00000028574-D1 Bos grunniens ENSBTAP00000028574-D1 I 0.000
MAFF Bos taurus ENSBTAG00000021435 I 0.000
Brh_R009272 Buceros rhinoceros Brh_R009272 I 0.000
MAFF Callithrix jacchus ENSCJAG00000011992 I 0.000
Aan_R011585 Calypte anna Aan_R011585 I 0.000
MAFF Canis familiaris ENSCAFG00000029842 I 0.000
Cmyd_10007723 Chelonia mydas Cmyd_10007723 I 0.000
ENSCSAG00000006757 Chlorocebus sabaeus ENSCSAG00000006757 I 0.000
maff Danio rerio ENSDARG00000028957 I 0.000
Maff Dipodomys ordii ENSDORG00000013449 I 0.000
ENSFALG00000012611 Ficedula albicollis ENSFALG00000012611 I 0.000
ENSGALG00000012277 Gallus gallus ENSGALG00000012277 I 0.000
mafgb Gasterosteus aculeatus ENSGACG00000019041 I 0.000
Gfo_R004700 Geospiza fortis Gfo_R004700 I 0.000
MAFF Gorilla gorilla ENSGGOG00000021932 I 0.000
MAFF Homo sapiens ENSG00000185022 D 0.000
ENSSTOG00000025460 Ictidomys tridecemlineatus ENSSTOG00000025460 I 0.000
ENSLACG00000007109 Latimeria chalumnae ENSLACG00000007109 I 0.000
MAFF Loxodonta africana ENSLAFG00000022547 I 0.000
ENSMMUP00000018288 Macaca fascicularis ENSMMUP00000018288 I 0.000
ENSMMUG00000013915 Macaca mulatta ENSMMUG00000013915 I 0.000
ENSMEUG00000002984 Macropus eugenii ENSMEUG00000002984 I 0.000
MAFF Meleagris gallopavo ENSMGAG00000015937 I 0.000
ENSMICG00000011572 Microcebus murinus ENSMICG00000011572 I 0.000
MAFF Monodelphis domestica ENSMODG00000018732 I 0.000
ENSMPUG00000013085 Mustela putorius furo ENSMPUG00000013085 I 0.000
Maff Mus musculus ENSMUSG00000042622 D 0.000
MAFF Myotis lucifugus ENSMLUG00000011358 I 0.000
ENSNLEG00000015068 Nomascus leucogenys ENSNLEG00000015068 I 0.000
Ogr11652 Ophisaurus gracilis Ogr11652 I 0.000
ENSONIG00000001329 Oreochromis niloticus ENSONIG00000001329 I 0.000
ENSONIG00000019674 Oreochromis niloticus ENSONIG00000019674 I 0.000
MAFF Oryctolagus cuniculus ENSOCUG00000006266 I 0.000
MAFG Oryzias latipes ENSORLG00000012170 I 0.000
mafk Oryzias latipes ENSORLG00000004687 I 0.000
MAFF Otolemur garnettii ENSOGAG00000027848 I 0.000
ENSOARG00000015236 Ovis aries ENSOARG00000015236 I 0.000
MAFF Pan troglodytes ENSPTRG00000029431 I 0.000
ENSPANG00000020550 Papio anubis ENSPANG00000020550 I 0.000
ENSPFOG00000002983 Poecilia formosa ENSPFOG00000002983 I 0.000
ENSPFOG00000005759 Poecilia formosa ENSPFOG00000005759 I 0.000
ENSPFOG00000012736 Poecilia formosa ENSPFOG00000012736 I 0.000
Pvit_08359 Pogona vitticeps Pvit_08359 I 0.000
ENSPPYG00000011816 Pongo abelii ENSPPYG00000011816 I 0.000
MAFF Procavia capensis ENSPCAG00000013370 I 0.000
MAFK Pteropus vampyrus ENSPVAG00000013872 I 0.000
Maff Rattus norvegicus ENSRNOG00000012886 I 0.000
MAFF Sus scrofa ENSSSCG00000030165 I 0.000
MAFF Taeniopygia guttata ENSTGUG00000010431 I 0.000
mafk Takifugu rubripes ENSTRUG00000013716 I 0.000
maff Takifugu rubripes ENSTRUG00000016981 I 0.000
mafk Tetraodon nigroviridis ENSTNIG00000004471 I 0.000
maff Tetraodon nigroviridis ENSTNIG00000001100 I 0.000
MAFF Tursiops truncatus ENSTTRG00000005618 I 0.000
ENSXMAG00000012964 Xiphophorus maculatus ENSXMAG00000012964 I 0.000
ENSXMAG00000009331 Xiphophorus maculatus ENSXMAG00000009331 I 0.000