Tal_R009434 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R009434 T137680_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH

DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.801 0.985
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN

NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.801 0.985
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH

DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.801 0.985
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.801 0.985
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN

NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.801 0.985
KLF4
M10217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.801 0.985
KLF4
M10218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.801 0.985
KLF4
M10219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.801 0.985
KLF4
M10220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.801 0.985
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.801 0.985
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.801 0.928
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH

DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.794 0.954
KLF2
M10210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.794 0.954
KLF2
M10211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.794 0.954
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.794 0.954
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH

DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.778 0.846
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH

DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.778 0.846
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH

DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.778 0.846
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH

DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.778 0.846
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH

DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.778 0.846
KLF5
M10149_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.778 0.846
KLF5
M10150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.778 0.846
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH

DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.778 0.846
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH

DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.778 0.831
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.778 0.831
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.778 0.831
KLF3
M10172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.778 0.831
KLF3
M10173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.778 0.831
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.778 0.831
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN

NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.778 0.831
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM

KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.765 0.892
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH

DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.765 0.892
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH

DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.765 0.892
KLF1
M10163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.765 0.892
KLF1
M10164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.765 0.892
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH

DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.765 0.877
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW

WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.762 0.862
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH

DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.762 0.862
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN

NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.762 0.862
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH

DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.762 0.831
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH

DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.762 0.831
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC

GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.762 0.831
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN

NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.762 0.831
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH

DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.762 0.831
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH

DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.762 0.815
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.762 0.815
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.762 0.815
KLF6
M10113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.762 0.815
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.762 0.815
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R009434 C2H2 ZF 1 19
Tal_R009434 C2H2 ZF 25 49
Tal_R009434 C2H2 ZF 55 77

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

572 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action