CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Tal_R012308
(
Tyto alba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Tal_R012308
T137719_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.767
0.921
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.767
0.921
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.767
0.921
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.767
0.921
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tal_R012308
C2H2 ZF
316
341
QVCQWIDCSAAYDQQDELVRHIEKTH
Tal_R012308
C2H2 ZF
350
377
FTCFWAGCVRRYKPFNARYKLLIHMRVH
Tal_R012308
C2H2 ZF
384
407
KCMFEGCNKAFSRLENLKIHLRSH
Tal_R012308
C2H2 ZF
413
437
YLCQHPGCQKAFSNSSDRAKHQRTH
Tal_R012308
C2H2 ZF
443
467
YACQIPGCSKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Tyto alba
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy