C55C2.1_CONSTRUCT (PBM CONSTRUCTS)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 C55C2.1_CONSTRUCT T137733_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00		 PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN		 PBM
Narasimhan et al.(2015)
pTH10623		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00649_2.00 C2H2 ZF 51 73
M00649_2.00 C2H2 ZF 104 126
M00649_2.00 C2H2 ZF 132 153

DNA Binding Domains

Protein ID Domain From To Sequence
C55C2.1_CONSTRUCT C2H2 ZF 51 73
C55C2.1_CONSTRUCT C2H2 ZF 104 126
C55C2.1_CONSTRUCT C2H2 ZF 132 153

Links

Other C2H2 ZF family TFs
Other PBM CONSTRUCTS TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scrt-1 Caenorhabditis elegans WBGene00016948 I 0.827
CRE30071 Caenorhabditis remanei CRE30071 I 0.824
CBG04163 Caenorhabditis briggsae CBG04163 I 0.808
nOo.2.0.1.g09798 Onchocerca ochengi nOo.2.0.1.g09798 I 0.765
nLs.2.1.2.g04589 Litomosoides sigmodontis nLs.2.1.2.g04589 I 0.765
WBGene00245863 Onchocerca volvulus WBGene00245863 I 0.765
WUBG_05161 Wuchereria bancrofti WUBG_05161 I 0.765
TCLT_0000703901 Thelazia callipaeda TCLT_0000703901 I 0.761
EEL_0000427701 Elaeophora elaphi EEL_0000427701 I 0.761
SMUV_0000156601 Syphacia muris SMUV_0000156601 I 0.761
CJA18229 Caenorhabditis japonica CJA18229 I 0.757
OESDEN_06135 Oesophagostomum dentatum OESDEN_06135 I 0.757