CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_10393_CONSTRUCT
(
PBM CONSTRUCTS
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_kg.C_10393_CONSTRUCT
T137734_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_kg.C_10393_CONSTRUCT
M01189_2.00
PBM CONSTRUCTS
NRCTGCGSN
NSCGCAGYN
PBM
Lambert et al.(2019)
pTH11154
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01189_2.00
C2H2 ZF
68
90
YKCPACPRGFARAYNLKTHMATH
M01189_2.00
C2H2 ZF
98
123
HVCPHHNCGRSFSRKHDLGRHLVSIH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_10393_CONSTRUCT
C2H2 ZF
68
90
YKCPACPRGFARAYNLKTHMATH
estExt_fgenesh1_kg.C_10393_CONSTRUCT
C2H2 ZF
98
123
HVCPHHNCGRSFSRKHDLGRHLVSIH
Links
Other
C2H2 ZF
family TFs
Other
PBM CONSTRUCTS
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_84085
Schizophyllum commune
SCHCODRAFT_84085
I
0.827
SERLA73DRAFT_176077
Serpula lacrymans
SERLA73DRAFT_176077
I
0.810
K443DRAFT_91011
Laccaria amethystina
K443DRAFT_91011
I
0.806
AGABI2DRAFT_189981
Agaricus bisporus
AGABI2DRAFT_189981
I
0.805
Moror_257
Moniliophthora roreri
Moror_257
I
0.800
PILCRDRAFT_96544
Piloderma croceum
PILCRDRAFT_96544
I
0.797
M404DRAFT_665352
Pisolithus tinctorius
M404DRAFT_665352
I
0.797
PISMIDRAFT_675973
Pisolithus microcarpus
PISMIDRAFT_675973
I
0.797
CC1G_04390
Coprinopsis cinerea
CC1G_04390
I
0.796
CY34DRAFT_118166
Suillus luteus
CY34DRAFT_118166
I
0.791
PAXRUDRAFT_131339
Paxillus rubicundulus
PAXRUDRAFT_131339
I
0.786
SCLCIDRAFT_108969
Scleroderma citrinum
SCLCIDRAFT_108969
I
0.786
LACBIDRAFT_301763
Laccaria bicolor
LACBIDRAFT_301763
I
0.782
GALMADRAFT_294541
Galerina marginata
GALMADRAFT_294541
I
0.782
M413DRAFT_228760
Hebeloma cylindrosporum
M413DRAFT_228760
I
0.782
GLOTRDRAFT_113478
Gloeophyllum trabeum
GLOTRDRAFT_113478
I
0.767
JAAARDRAFT_102683
Jaapia argillacea
JAAARDRAFT_102683
I
0.767
DACRYDRAFT_67771
Dacryopinax sp
DACRYDRAFT_67771
I
0.757
FOMPIDRAFT_1024333
Fomitopsis pinicola
FOMPIDRAFT_1024333
I
0.756