28345.m000111 (Ricinus communis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 28345.m000111 T137764_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
28345.m000111 C2H2 ZF 35 57

Links

Other C2H2 ZF family TFs
Other Ricinus communis TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_021876 Theobroma cacao TCM_021876 N 0.827
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.827
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.827
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.825
Pm002649 Prunus mume Pm002649 N 0.815
Ca_12901 Cicer arietinum Ca_12901 I 0.805
GLYMA13G34450 Glycine max GLYMA13G34450 I 0.805
GLYMA12G35930 Glycine max GLYMA12G35930 I 0.805
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I 0.803
OS11G0707300 Oryza sativa OS11G0707300 I 0.803
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I 0.803
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I 0.803
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I 0.803
Carubv10016073m.g Capsella rubella Carubv10016073m.g I 0.803
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I 0.803
OBART11G23770 Oryza barthii OBART11G23770 I 0.803
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I 0.803
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I 0.803
Carubv10024766m.g Capsella rubella Carubv10024766m.g I 0.803
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I 0.803
OMERI07G13080 Oryza meridionalis OMERI07G13080 I 0.803
ONIVA11G23290 Oryza nivara ONIVA11G23290 I 0.803
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I 0.803
TRIUR3_03721 Triticum urartu TRIUR3_03721 I 0.803
cassava3359.m1 Manihot esculenta cassava3359.m1 I 0.803
cassava40050.m1 Manihot esculenta cassava40050.m1 I 0.803
29603.m000536 Ricinus communis 29603.m000536 I 0.803
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I 0.803
Pm009420 Prunus mume Pm009420 I 0.803
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I 0.803
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I 0.803
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I 0.803
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I 0.803
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I 0.803
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I 0.803
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I 0.803
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I 0.803
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I 0.803
Si024070m.g Setaria italica Si024070m.g I 0.803
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I 0.803
OLONG_005038 Oryza longistaminata OLONG_005038 I 0.803
Bo3g003640 Brassica oleracea Bo3g003640 I 0.803
MDP0000225209 Malus domestica MDP0000225209 I 0.803
Bo1g102390 Brassica oleracea Bo1g102390 I 0.803
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I 0.803
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I 0.803
Bra023759 Brassica rapa Bra023759 I 0.803
Bra005874 Brassica rapa Bra005874 I 0.803
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I 0.803
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I 0.803
BGIOSGA033510 Oryza indica BGIOSGA033510 I 0.803
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I 0.803
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I 0.803
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I 0.803
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I 0.803
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I 0.803
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I 0.803
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I 0.803
SUP Arabidopsis thaliana AT3G23130 I 0.803
ZFP11 Arabidopsis thaliana AT2G42410 I 0.803
Bra013257 Brassica rapa Bra013257 I 0.792
Bo1g017920 Brassica oleracea Bo1g017920 I 0.792
Cla021878 Citrullus lanatus Cla021878 I 0.792
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.792
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.792
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.792
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.792
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.792
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.792
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.792
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.792
Si011797m.g Setaria italica Si011797m.g I 0.791
OMERI04G02610 Oryza meridionalis OMERI04G02610 I 0.780
Pavir.Gb02516 Panicum virgatum Pavir.Gb02516 I 0.780
ONIVA04G01910 Oryza nivara ONIVA04G01910 I 0.780
OB04G12040 Oryza brachyantha OB04G12040 I 0.780
OLONG_022667 Oryza longistaminata OLONG_022667 I 0.780
BGIOSGA015610 Oryza indica BGIOSGA015610 I 0.780
OBART04G02370 Oryza barthii OBART04G02370 I 0.780
OGLUM04G02100 Oryza glumaepatula OGLUM04G02100 I 0.780
Cla016442 Citrullus lanatus Cla016442 I 0.780
LPERR04G01660 Leersia perrieri LPERR04G01660 I 0.780
GRMZM2G137736 Zea mays GRMZM2G137736 I 0.780
F775_21953 Aegilops tauschii F775_21953 I 0.780
OS04G0168100 Oryza sativa OS04G0168100 I 0.780
Cucsa.313240 Cucumis sativus Cucsa.313240 I 0.780
Sb06g001730 Sorghum bicolor Sb06g001730 I 0.780
Pavir.J31403 Panicum virgatum Pavir.J31403 I 0.780
ORUFI04G03150 Oryza rufipogon ORUFI04G03150 I 0.780
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N 0.779
SapurV1A.0292s0190 Salix purpurea SapurV1A.0292s0190 I 0.777
SapurV1A.0007s0800 Salix purpurea SapurV1A.0007s0800 I 0.777
Lus10021213.g Linum usitatissimum Lus10021213.g I 0.777
mgf024356m Mimulus guttatus mgf024356m I 0.777
Pavir.Bb00955 Panicum virgatum Pavir.Bb00955 I 0.777
Pavir.Ba02387 Panicum virgatum Pavir.Ba02387 I 0.777
Lus10022204.g Linum usitatissimum Lus10022204.g I 0.777
Si032478m.g Setaria italica Si032478m.g I 0.777
Traes_2AS_099955797 Triticum aestivum Traes_2AS_099955797 I 0.777
Traes_2BS_0544D9D4B Triticum aestivum Traes_2BS_0544D9D4B I 0.777
BRADI1G52490 Brachypodium distachyon BRADI1G52490 I 0.777
GLYMA07G16290 Glycine max GLYMA07G16290 I 0.777
GRMZM2G443109 Zea mays GRMZM2G443109 I 0.777
GRMZM2G409452 Zea mays GRMZM2G409452 I 0.777
Traes_2DS_035AA95E3 Triticum aestivum Traes_2DS_035AA95E3 I 0.777
Sb02g009930 Sorghum bicolor Sb02g009930 I 0.777
TRIUR3_25222 Triticum urartu TRIUR3_25222 I 0.777
MTR_1g075430 Medicago truncatula MTR_1g075430 N 0.767
Gorai.011G172000 Gossypium raimondii Gorai.011G172000 N 0.767
GSMUA_Achr8G14360_001 Musa acuminata GSMUA_Achr8G14360_001 N 0.767
MTR_4g064873 Medicago truncatula MTR_4g064873 N 0.767
LPERR07G09750 Leersia perrieri LPERR07G09750 N 0.767
gene30215-v1.0-hybrid Fragaria vesca gene30215-v1.0-hybrid N 0.767
evm.TU.supercontig_44.98 Carica papaya evm.TU.supercontig_44.98 N 0.767
OBART07G11660 Oryza barthii OBART07G11660 N 0.767
OB07G18110 Oryza brachyantha OB07G18110 N 0.767
MDP0000143134 Malus domestica MDP0000143134 N 0.767
MTR_7g063220 Medicago truncatula MTR_7g063220 I 0.767
chr1.CM0147.870.nc Lotus japonicus chr1.CM0147.870.nc I 0.767
GLYMA10G32810 Glycine max GLYMA10G32810 N 0.767
Bo7g065530 Brassica oleracea Bo7g065530 N 0.767
Bo9g059250 Brassica oleracea Bo9g059250 N 0.767
Bra033683 Brassica rapa Bra033683 N 0.767
GLYMA12G06340 Glycine max GLYMA12G06340 N 0.767
Cla021877 Citrullus lanatus Cla021877 N 0.767
orange1.1g037433m.g Citrus sinensis orange1.1g037433m.g N 0.767
BGIOSGA025569 Oryza indica BGIOSGA025569 N 0.767
GLYMA20G34840 Glycine max GLYMA20G34840 N 0.767
Bra027500 Brassica rapa Bra027500 N 0.767
Eucgr.H00184 Eucalyptus grandis Eucgr.H00184 N 0.767
PRUPE_ppa021945mg Prunus persica PRUPE_ppa021945mg N 0.767
PRUPE_ppa016491mg Prunus persica PRUPE_ppa016491mg N 0.767
OS07G0417400 Oryza sativa OS07G0417400 N 0.767
Pm009419 Prunus mume Pm009419 N 0.767
PRUPE_ppb012667mg Prunus persica PRUPE_ppb012667mg N 0.767
scaffold_800693.1 Arabidopsis lyrata scaffold_800693.1 N 0.767
cassava32634.m1 Manihot esculenta cassava32634.m1 N 0.767
Cucsa.117650 Cucumis sativus Cucsa.117650 N 0.767
Cla008348 Citrullus lanatus Cla008348 N 0.767
TCM_020819 Theobroma cacao TCM_020819 N 0.767
Cagra.19122s0001 Capsella grandiflora Cagra.19122s0001 N 0.767
Bostr.3148s0115 Boechera stricta Bostr.3148s0115 N 0.767
ONIVA07G09630 Oryza nivara ONIVA07G09630 N 0.767
OLONG_012182 Oryza longistaminata OLONG_012182 N 0.767
Carubv10028256m.g Capsella rubella Carubv10028256m.g N 0.767
Ciclev10006751m.g Citrus clementina Ciclev10006751m.g N 0.767
ORUFI07G11810 Oryza rufipogon ORUFI07G11810 N 0.767
ONIVA07G09640 Oryza nivara ONIVA07G09640 N 0.767
ORGLA07G0099100 Oryza glaberrima ORGLA07G0099100 N 0.767
OPUNC07G10480 Oryza punctata OPUNC07G10480 N 0.767
OGLUM07G11160 Oryza glumaepatula OGLUM07G11160 N 0.767
Cla006093 Citrullus lanatus Cla006093 N 0.764
PK22236.1 Cannabis sativa PK22236.1 N 0.764
AMTR_s00012p00258620 Amborella trichopoda AMTR_s00012p00258620 N 0.764
PDK_20s1360411g002 Phoenix dactylifera PDK_20s1360411g002 N 0.764
AMTR_s00009p00194700 Amborella trichopoda AMTR_s00009p00194700 N 0.764
orange1.1g044013m.g Citrus sinensis orange1.1g044013m.g N 0.764
MTR_1g070250 Medicago truncatula MTR_1g070250 N 0.764
VIT_06s0004g05260 Vitis vinifera VIT_06s0004g05260 N 0.764
Cucsa.016990 Cucumis sativus Cucsa.016990 N 0.764
Ciclev10022375m.g Citrus clementina Ciclev10022375m.g N 0.764
F775_00917 Aegilops tauschii F775_00917 I 0.758
mg013419m Mimulus guttatus mg013419m I 0.757