CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava21316.m1
(
Manihot esculenta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
cassava21316.m1
T137837_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN
NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.776
0.696
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH
DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.776
0.696
ZAT10
M01852_2.00
Arabidopsis thaliana
NNHASWN
NWSTDNN
PBM
Weirauch et al.(2014)
pTH7255
0.760
0.652
ZAT10
M06799_2.00
Arabidopsis thaliana
WSHHCACT
AGTGDDSW
Dap-seq
OMalley et al.(2016)
STZ_colamp_a
0.760
0.652
ZAT10
M06800_2.00
Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR
Dap-seq
OMalley et al.(2016)
STZ_col
0.760
0.652
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN
NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.759
0.652
ZAT6
M00861_2.00
Arabidopsis thaliana
NNHRSTN
NASYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT6
0.759
0.630
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava21316.m1
C2H2 ZF
193
215
HKCETCQRSFRSYQALGGHKASH
cassava21316.m1
C2H2 ZF
252
274
FKCPFCDKVFESGQALGGHKKVH
Links
Other
C2H2 ZF
family TFs
Other
Manihot esculenta
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R014758
Calypte anna
Aan_R014758
I
0.000
Afo_R004007
Aptenodytes forsteri
Afo_R004007
I
0.000
Alligator_sinensis_CCG011250.1
Alligator sinensis
Alligator_sinensis_CCG011250.1
I
0.000
Brh_R005182
Buceros rhinoceros
Brh_R005182
I
0.000
Cmyd_10021057
Chelonia mydas
Cmyd_10021057
I
0.000
ZNF281
Anolis carolinensis
ENSACAG00000006286
I
0.000
ZNF148
Anolis carolinensis
ENSACAG00000010047
I
0.000
ENSAMXG00000006043
Astyanax mexicanus
ENSAMXG00000006043
I
0.000
ENSAMXG00000006245
Astyanax mexicanus
ENSAMXG00000006245
I
0.000
ENSAMXG00000015147
Astyanax mexicanus
ENSAMXG00000015147
I
0.000
ZNF281
Callithrix jacchus
ENSCJAG00000005104
I
0.000
ENSCSAG00000000250
Chlorocebus sabaeus
ENSCSAG00000000250
I
0.000
znf281a
Danio rerio
ENSDARG00000000567
I
0.000
znf281b
Danio rerio
ENSDARG00000035910
I
0.000
znf148
Danio rerio
ENSDARG00000055106
I
0.000
ZNF281
Dasypus novemcinctus
ENSDNOG00000016981
I
0.000
Zfp281
Dipodomys ordii
ENSDORG00000002833
I
0.000
ZNF281
Equus caballus
ENSECAG00000024354
I
0.000
ZNF281
Erinaceus europaeus
ENSEEUG00000011443
I
0.000
ENSFALG00000014467
Ficedula albicollis
ENSFALG00000014467
I
0.000
ZNF281
Felis catus
ENSFCAG00000028447
I
0.000
ZNF281
Homo sapiens
ENSG00000162702
D
0.000
znf281b
Gasterosteus aculeatus
ENSGACG00000006858
I
0.000
znf281a
Gasterosteus aculeatus
ENSGACG00000009536
I
0.000
ZNF281
Gorilla gorilla
ENSGGOG00000010349
I
0.000
ENSGMOG00000001704
Gadus morhua
ENSGMOG00000001704
I
0.000
ENSGMOG00000008854
Gadus morhua
ENSGMOG00000008854
I
0.000
ENSLACG00000006364
Latimeria chalumnae
ENSLACG00000006364
I
0.000
ENSLACG00000014572
Latimeria chalumnae
ENSLACG00000014572
I
0.000
ENSLOCG00000011584
Lepisosteus oculatus
ENSLOCG00000011584
I
0.000
ENSMEUG00000011709
Macropus eugenii
ENSMEUG00000011709
I
0.000
ZNF281
Microcebus murinus
ENSMICG00000001070
I
0.000
ZNF281
Macaca mulatta
ENSMMUG00000007334
I
0.000
ZNF281
Monodelphis domestica
ENSMODG00000012840
I
0.000
ENSMPUG00000019246
Mustela putorius furo
ENSMPUG00000019246
I
0.000
Zfp281
Mus musculus
ENSMUSG00000041483
D
0.000
ENSNLEG00000018067
Nomascus leucogenys
ENSNLEG00000018067
I
0.000
ZNF281
Ornithorhynchus anatinus
ENSOANG00000004857
I
0.000
ZNF281
Oryctolagus cuniculus
ENSOCUG00000010120
I
0.000
ZNF281
Otolemur garnettii
ENSOGAG00000010366
I
0.000
ENSONIG00000000839
Oreochromis niloticus
ENSONIG00000000839
I
0.000
ENSONIG00000016453
Oreochromis niloticus
ENSONIG00000016453
I
0.000
znf281a
Oryzias latipes
ENSORLG00000002799
I
0.000
znf281b
Oryzias latipes
ENSORLG00000005292
I
0.000
znf148
Oryzias latipes
ENSORLG00000015950
I
0.000
ENSP00000356322
Macaca fascicularis
ENSP00000356322
I
0.000
ENSP00000356322-D1
Bos grunniens
ENSP00000356322-D1
I
0.000
ENSPANG00000017386
Papio anubis
ENSPANG00000017386
I
0.000
ENSPFOG00000000851
Poecilia formosa
ENSPFOG00000000851
I
0.000
ENSPFOG00000008024
Poecilia formosa
ENSPFOG00000008024
I
0.000
ZNF281
Pan troglodytes
ENSPTRG00000015318
I
0.000
Zfp281
Rattus norvegicus
ENSRNOG00000058643
I
0.000
ZNF281
Sus scrofa
ENSSSCG00000010911
I
0.000
ZNF281
Taeniopygia guttata
ENSTGUG00000004438
I
0.000
znf281a
Tetraodon nigroviridis
ENSTNIG00000016430
I
0.000
znf281b
Tetraodon nigroviridis
ENSTNIG00000018917
I
0.000
znf281b
Takifugu rubripes
ENSTRUG00000008207
I
0.000
znf281a
Takifugu rubripes
ENSTRUG00000016619
I
0.000
ENSTSYG00000007604
Tarsius syrichta
ENSTSYG00000007604
I
0.000
ZNF281
Tursiops truncatus
ENSTTRG00000004326
I
0.000
Gfo_R006633
Geospiza fortis
Gfo_R006633
I
0.000
Ogr00130
Ophisaurus gracilis
Ogr00130
I
0.000
Pvit_03082
Pogona vitticeps
Pvit_03082
I
0.000
Pvit_14619
Pogona vitticeps
Pvit_14619
I
0.000
Tal_R010113
Tyto alba
Tal_R010113
I
0.000
znf281
Xenopus tropicalis
XB-GENE-5933312
I
0.000