cassava21316.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava21316.m1 T137837_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.776 0.696
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.776 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.760 0.652
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.760 0.652
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.760 0.652
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.759 0.652
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.759 0.630
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21316.m1 C2H2 ZF 193 215
cassava21316.m1 C2H2 ZF 252 274

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014758 Calypte anna Aan_R014758 I 0.000
Afo_R004007 Aptenodytes forsteri Afo_R004007 I 0.000
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I 0.000
Brh_R005182 Buceros rhinoceros Brh_R005182 I 0.000
Cmyd_10021057 Chelonia mydas Cmyd_10021057 I 0.000
ZNF281 Anolis carolinensis ENSACAG00000006286 I 0.000
ZNF148 Anolis carolinensis ENSACAG00000010047 I 0.000
ENSAMXG00000006043 Astyanax mexicanus ENSAMXG00000006043 I 0.000
ENSAMXG00000006245 Astyanax mexicanus ENSAMXG00000006245 I 0.000
ENSAMXG00000015147 Astyanax mexicanus ENSAMXG00000015147 I 0.000
ZNF281 Callithrix jacchus ENSCJAG00000005104 I 0.000
ENSCSAG00000000250 Chlorocebus sabaeus ENSCSAG00000000250 I 0.000
znf281a Danio rerio ENSDARG00000000567 I 0.000
znf281b Danio rerio ENSDARG00000035910 I 0.000
znf148 Danio rerio ENSDARG00000055106 I 0.000
ZNF281 Dasypus novemcinctus ENSDNOG00000016981 I 0.000
Zfp281 Dipodomys ordii ENSDORG00000002833 I 0.000
ZNF281 Equus caballus ENSECAG00000024354 I 0.000
ZNF281 Erinaceus europaeus ENSEEUG00000011443 I 0.000
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I 0.000
ZNF281 Felis catus ENSFCAG00000028447 I 0.000
ZNF281 Homo sapiens ENSG00000162702 D 0.000
znf281b Gasterosteus aculeatus ENSGACG00000006858 I 0.000
znf281a Gasterosteus aculeatus ENSGACG00000009536 I 0.000
ZNF281 Gorilla gorilla ENSGGOG00000010349 I 0.000
ENSGMOG00000001704 Gadus morhua ENSGMOG00000001704 I 0.000
ENSGMOG00000008854 Gadus morhua ENSGMOG00000008854 I 0.000
ENSLACG00000006364 Latimeria chalumnae ENSLACG00000006364 I 0.000
ENSLACG00000014572 Latimeria chalumnae ENSLACG00000014572 I 0.000
ENSLOCG00000011584 Lepisosteus oculatus ENSLOCG00000011584 I 0.000
ENSMEUG00000011709 Macropus eugenii ENSMEUG00000011709 I 0.000
ZNF281 Microcebus murinus ENSMICG00000001070 I 0.000
ZNF281 Macaca mulatta ENSMMUG00000007334 I 0.000
ZNF281 Monodelphis domestica ENSMODG00000012840 I 0.000
ENSMPUG00000019246 Mustela putorius furo ENSMPUG00000019246 I 0.000
Zfp281 Mus musculus ENSMUSG00000041483 D 0.000
ENSNLEG00000018067 Nomascus leucogenys ENSNLEG00000018067 I 0.000
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I 0.000
ZNF281 Oryctolagus cuniculus ENSOCUG00000010120 I 0.000
ZNF281 Otolemur garnettii ENSOGAG00000010366 I 0.000
ENSONIG00000000839 Oreochromis niloticus ENSONIG00000000839 I 0.000
ENSONIG00000016453 Oreochromis niloticus ENSONIG00000016453 I 0.000
znf281a Oryzias latipes ENSORLG00000002799 I 0.000
znf281b Oryzias latipes ENSORLG00000005292 I 0.000
znf148 Oryzias latipes ENSORLG00000015950 I 0.000
ENSP00000356322 Macaca fascicularis ENSP00000356322 I 0.000
ENSP00000356322-D1 Bos grunniens ENSP00000356322-D1 I 0.000
ENSPANG00000017386 Papio anubis ENSPANG00000017386 I 0.000
ENSPFOG00000000851 Poecilia formosa ENSPFOG00000000851 I 0.000
ENSPFOG00000008024 Poecilia formosa ENSPFOG00000008024 I 0.000
ZNF281 Pan troglodytes ENSPTRG00000015318 I 0.000
Zfp281 Rattus norvegicus ENSRNOG00000058643 I 0.000
ZNF281 Sus scrofa ENSSSCG00000010911 I 0.000
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I 0.000
znf281a Tetraodon nigroviridis ENSTNIG00000016430 I 0.000
znf281b Tetraodon nigroviridis ENSTNIG00000018917 I 0.000
znf281b Takifugu rubripes ENSTRUG00000008207 I 0.000
znf281a Takifugu rubripes ENSTRUG00000016619 I 0.000
ENSTSYG00000007604 Tarsius syrichta ENSTSYG00000007604 I 0.000
ZNF281 Tursiops truncatus ENSTTRG00000004326 I 0.000
Gfo_R006633 Geospiza fortis Gfo_R006633 I 0.000
Ogr00130 Ophisaurus gracilis Ogr00130 I 0.000
Pvit_03082 Pogona vitticeps Pvit_03082 I 0.000
Pvit_14619 Pogona vitticeps Pvit_14619 I 0.000
Tal_R010113 Tyto alba Tal_R010113 I 0.000
znf281 Xenopus tropicalis XB-GENE-5933312 I 0.000