Cucsa.016990 (Cucumis sativus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cucsa.016990 T137899_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.016990.1 C2H2 ZF 44 66

Links

Other C2H2 ZF family TFs
Other Cucumis sativus TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g070250 Medicago truncatula MTR_1g070250 N 0.827
Cla006093 Citrullus lanatus Cla006093 N 0.827
orange1.1g044013m.g Citrus sinensis orange1.1g044013m.g N 0.827
Ciclev10022375m.g Citrus clementina Ciclev10022375m.g N 0.827
PK22236.1 Cannabis sativa PK22236.1 N 0.827
AMTR_s00012p00258620 Amborella trichopoda AMTR_s00012p00258620 N 0.817
PDK_20s1360411g002 Phoenix dactylifera PDK_20s1360411g002 N 0.817
VIT_06s0004g05260 Vitis vinifera VIT_06s0004g05260 N 0.817
AMTR_s00009p00194700 Amborella trichopoda AMTR_s00009p00194700 N 0.817
Pm009419 Prunus mume Pm009419 N 0.814
cassava32634.m1 Manihot esculenta cassava32634.m1 N 0.814
Si032478m.g Setaria italica Si032478m.g I 0.814
Bostr.3148s0115 Boechera stricta Bostr.3148s0115 N 0.814
Cucsa.117650 Cucumis sativus Cucsa.117650 N 0.814
Cla021877 Citrullus lanatus Cla021877 N 0.814
Cla008348 Citrullus lanatus Cla008348 N 0.814
Traes_2BS_0544D9D4B Triticum aestivum Traes_2BS_0544D9D4B I 0.814
Traes_2DS_035AA95E3 Triticum aestivum Traes_2DS_035AA95E3 I 0.814
TRIUR3_25222 Triticum urartu TRIUR3_25222 I 0.814
Cagra.19122s0001 Capsella grandiflora Cagra.19122s0001 N 0.814
Traes_2AS_099955797 Triticum aestivum Traes_2AS_099955797 I 0.814
Ciclev10006751m.g Citrus clementina Ciclev10006751m.g N 0.814
MDP0000143134 Malus domestica MDP0000143134 N 0.814
Lus10022204.g Linum usitatissimum Lus10022204.g I 0.814
orange1.1g037433m.g Citrus sinensis orange1.1g037433m.g N 0.814
Pavir.Ba02387 Panicum virgatum Pavir.Ba02387 I 0.814
SapurV1A.0007s0800 Salix purpurea SapurV1A.0007s0800 I 0.814
Pavir.Bb00955 Panicum virgatum Pavir.Bb00955 I 0.814
Lus10021213.g Linum usitatissimum Lus10021213.g I 0.814
Gorai.011G172000 Gossypium raimondii Gorai.011G172000 N 0.814
scaffold_800693.1 Arabidopsis lyrata scaffold_800693.1 N 0.814
SapurV1A.0292s0190 Salix purpurea SapurV1A.0292s0190 I 0.814
Eucgr.H00184 Eucalyptus grandis Eucgr.H00184 N 0.814
evm.TU.supercontig_44.98 Carica papaya evm.TU.supercontig_44.98 N 0.814
gene30215-v1.0-hybrid Fragaria vesca gene30215-v1.0-hybrid N 0.814
Carubv10028256m.g Capsella rubella Carubv10028256m.g N 0.814
TCM_020819 Theobroma cacao TCM_020819 N 0.814
GSMUA_Achr8G14360_001 Musa acuminata GSMUA_Achr8G14360_001 N 0.814
GRMZM2G443109 Zea mays GRMZM2G443109 I 0.814
GRMZM2G409452 Zea mays GRMZM2G409452 I 0.814
LPERR07G09750 Leersia perrieri LPERR07G09750 N 0.814
MTR_1g075430 Medicago truncatula MTR_1g075430 N 0.814
Sb02g009930 Sorghum bicolor Sb02g009930 I 0.814
MTR_4g064873 Medicago truncatula MTR_4g064873 N 0.814
GLYMA20G34840 Glycine max GLYMA20G34840 N 0.814
GLYMA12G06340 Glycine max GLYMA12G06340 N 0.814
Bo9g059250 Brassica oleracea Bo9g059250 N 0.814
Bo7g065530 Brassica oleracea Bo7g065530 N 0.814
BGIOSGA025569 Oryza indica BGIOSGA025569 N 0.814
Bra027500 Brassica rapa Bra027500 N 0.814
Bra033683 Brassica rapa Bra033683 N 0.814
GLYMA10G32810 Glycine max GLYMA10G32810 N 0.814
BRADI1G52490 Brachypodium distachyon BRADI1G52490 I 0.814
OBART07G11660 Oryza barthii OBART07G11660 N 0.814
OB07G18110 Oryza brachyantha OB07G18110 N 0.814
ORGLA07G0099100 Oryza glaberrima ORGLA07G0099100 N 0.814
OPUNC07G10480 Oryza punctata OPUNC07G10480 N 0.814
ORUFI07G11810 Oryza rufipogon ORUFI07G11810 N 0.814
OS07G0417400 Oryza sativa OS07G0417400 N 0.814
PRUPE_ppa021945mg Prunus persica PRUPE_ppa021945mg N 0.814
PRUPE_ppa016491mg Prunus persica PRUPE_ppa016491mg N 0.814
ONIVA07G09630 Oryza nivara ONIVA07G09630 N 0.814
ONIVA07G09640 Oryza nivara ONIVA07G09640 N 0.814
OLONG_012182 Oryza longistaminata OLONG_012182 N 0.814
OGLUM07G11160 Oryza glumaepatula OGLUM07G11160 N 0.814
GSMUA_Achr11G02150_001 Musa acuminata GSMUA_Achr11G02150_001 N 0.794
F775_00917 Aegilops tauschii F775_00917 I 0.794
MTR_7g063220 Medicago truncatula MTR_7g063220 I 0.766
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.766
PRUPE_ppb012667mg Prunus persica PRUPE_ppb012667mg N 0.766
chr1.CM0147.870.nc Lotus japonicus chr1.CM0147.870.nc I 0.766
GLYMA07G16290 Glycine max GLYMA07G16290 I 0.766
Pm002649 Prunus mume Pm002649 N 0.766
mgf024356m Mimulus guttatus mgf024356m I 0.766
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.764
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N 0.764
TCM_021876 Theobroma cacao TCM_021876 N 0.764
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.764
28345.m000111 Ricinus communis 28345.m000111 N 0.764