Cucsa.391680 (Cucumis sativus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cucsa.391680 T137951_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.391680.1 C2H2 ZF 1435 1458
Cucsa.391680.1 C2H2 ZF 1459 1482
Cucsa.391680.1 C2H2 ZF 1518 1544

Links

Other C2H2 ZF family TFs
Other Cucumis sativus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_4.49 Carica papaya evm.TU.supercontig_4.49 N 0.813
POPTR_0012s09390 Populus trichocarpa POPTR_0012s09390 N 0.810
TCM_014549 Theobroma cacao TCM_014549 N 0.797
Ciclev10018473m.g Citrus clementina Ciclev10018473m.g N 0.791
Gorai.006G270100 Gossypium raimondii Gorai.006G270100 N 0.790
Aquca_011_00361 Aquilegia coerulea Aquca_011_00361 N 0.784
SapurV1A.0486s0080 Salix purpurea SapurV1A.0486s0080 N 0.764
POPTR_0015s10040 Populus trichocarpa POPTR_0015s10040 N 0.764
30147.m013814 Ricinus communis 30147.m013814 N 0.764
cassava3225.m1 Manihot esculenta cassava3225.m1 N 0.760
Eucgr.K02763 Eucalyptus grandis Eucgr.K02763 N 0.758