CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.5.376.1
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw1.5.376.1
T138058_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.774
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.5.376.1
C2H2 ZF
16
38
YNCPMCSKAFYRLEHQTRHIRTH
e_gw1.5.376.1
C2H2 ZF
44
68
HSCTFNGCEKRFSRLDELTRHTRIH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.6.291.1
Phycomyces blakesleeanus
gw1.6.291.1
I
0.774
RO3G_16591
Rhizopus oryzae
RO3G_16591
D
0.774
GNLVRS01_PISO0B08339g
Millerozyma farinosa
GNLVRS01_PISO0B08339g
I
0.768
PGUG_04840
Meyerozyma guilliermondii
PGUG_04840
I
0.768
GNLVRS01_PISO0A08272g
Millerozyma farinosa
GNLVRS01_PISO0A08272g
I
0.768
CANTEDRAFT_121320
Candida tenuis
CANTEDRAFT_121320
I
0.768
PGUG_04840
Candida guilliermondii
PGUG_04840
I
0.768
BN7_1014
Wickerhamomyces ciferrii
BN7_1014
I
0.767
DEHA2F03454g
Debaryomyces hansenii
DEHA2F03454g
I
0.763
TBLA_0A08910
Tetrapisispora blattae
TBLA_0A08910
I
0.761