CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.3.285.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.3.285.1
T138200_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.3.285.1
C2H2 ZF
87
110
YKCCSCERQFADLGALGRHTKYAH
e_gw.3.285.1
C2H2 ZF
118
140
WKCDLCERAFTSSSKLQVHIMVH
e_gw.3.285.1
C2H2 ZF
146
168
HKCNYCEKTFTDPSNLRTHLTIH
e_gw.3.285.1
C2H2 ZF
174
196
HACSVCNKTFRQKAHLLSHMVTH
e_gw.3.285.1
C2H2 ZF
202
224
MKCQFCDKMFSRQSDVKQHMYMH
e_gw.3.285.1
C2H2 ZF
230
252
VKCEECGKIFWRLQHLKKHMKSH
e_gw.3.285.1
C2H2 ZF
258
279
FPCDRCSKAFFTKYHLNRHKKA
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_1150080
Branchiostoma floridae
estExt_fgenesh2_pg.C_1150080
N
0.827