e_gw.471.22.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.471.22.1 T138304_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM

KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.807 0.936
GLIS3
M10169_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.807 0.936
GLIS3
M10170_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.807 0.936
GLIS3
M10171_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.807 0.936
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.471.22.1 C2H2 ZF 1 24
e_gw.471.22.1 C2H2 ZF 33 60
e_gw.471.22.1 C2H2 ZF 67 90
e_gw.471.22.1 C2H2 ZF 96 120
e_gw.471.22.1 C2H2 ZF 126 148

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action