e_gw.6.95.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.6.95.1 T138379_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.766 0.847
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.766 0.847
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.766 0.847
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.6.95.1 C2H2 ZF 1 21
e_gw.6.95.1 C2H2 ZF 31 52
e_gw.6.95.1 C2H2 ZF 56 78
e_gw.6.95.1 C2H2 ZF 84 106
e_gw.6.95.1 C2H2 ZF 112 133

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

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47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action