CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_10443
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_10443
T138498_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN
NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.763
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_10443
C2H2 ZF
57
79
HICTTCTRSFARLEHLKRHERSH
estExt_fgenesh1_pg.C_10443
C2H2 ZF
85
108
FECPQCTRCFARRDLLLRHQQKLH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy