CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_160092
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_160092
T138505_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_02507
M01447_2.00
Histoplasma capsulatum
NNCCCCTKD
HMAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10217
0.784
0.947
NCU05064
M01883_2.00
Neurospora crassa
NNYMCCTKD
HMAGGKRNN
PBM
Weirauch et al.(2014)
pTH8949
0.760
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_160092
C2H2 ZF
139
163
FFCTDFPPCNLSFTRSEHLARHIRR
estExt_fgenesh1_pg.C_160092
C2H2 ZF
162
178
RRFSRLDNLRQHAQTVH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy