CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_70029
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_70029
T138528_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_09143
M01450_2.00
Histoplasma capsulatum
WWTTTTTT
AAAAAAWW
PBM
Najafabadi et al.(2015a)
pTH11151
0.777
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_70029
C2H2 ZF
108
132
YQCTVPNCNKSFYQKTHLEIHIRAH
estExt_fgenesh1_pg.C_70029
C2H2 ZF
138
162
FNCKAPGCGQSFSQLGNLKTHERRH
estExt_fgenesh1_pg.C_70029
C2H2 ZF
168
190
YSCDICGKTFAQRGNVRAHKIVH
estExt_fgenesh1_pg.C_70029
C2H2 ZF
196
221
FTCKLDDCGKQFTQLGNLKSHQNKFH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy