estExt_fgenesh1_pg.C_chr_1.20297 (Pichia stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_chr_1.20297 T138536_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STP1
M00910_2.00
Saccharomyces cerevisiae
NYACGGCRCN

NGYGCCGTRN
PBM
Gordan et al.(2011)
Stp1
0.757 0.739
STP1
M08414_2.00
Saccharomyces cerevisiae
BGCGGCKB

VMGCCGCV
ChIP-chip
Mathelier et al.(2014)
MA0394.1
0.757 0.739
STP1
M08519_2.00
Saccharomyces cerevisiae
YRCGGCKB

VMGCCGYR
Misc
DeBoer et al.(2011)
YDR463W_660
0.757 0.739
STP1
M10390_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STP1_01
0.757 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_1.20297 C2H2 ZF 280 302

Links

Other C2H2 ZF family TFs
Other Pichia stipitis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
5271_YDR463W Saccharomyces mikatae 5271_YDR463W I 0.757
5542_YDR463W Saccharomyces paradoxus 5542_YDR463W I 0.757
5582_YDR463W Saccharomyces bayanus 5582_YDR463W I 0.757
AACERI_AaceriAFR461C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR461C I 0.757
AGOS_AFR461C Ashbya gossypii AGOS_AFR461C I 0.757
CAGL0E04312g Candida glabrata CAGL0E04312g I 0.757
CaO19.12426 Candida albicans CaO19.12426 N 0.764
CaO19.4961 Candida albicans CaO19.4961 N 0.764
CD36_12380 Candida dubliniensis CD36_12380 N 0.764
CORT_0D02790 Candida orthopsilosis CORT_0D02790 I 0.827
CTRG_03608 Candida tropicalis CTRG_03608 N 0.774
DEHA2E16478g Debaryomyces hansenii DEHA2E16478g I 0.779
Ecym_1404 Eremothecium cymbalariae Ecym_1404 I 0.757
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I 0.762
G210_3672 Candida maltosa G210_3672 N 0.776
GNLVRS01_PISO0M20868g Millerozyma farinosa GNLVRS01_PISO0M20868g I 0.779
GNLVRS01_PISO0N21111g Millerozyma farinosa GNLVRS01_PISO0N21111g I 0.779
JL09_g1496 Pichia kudriavzevii JL09_g1496 N 0.813
KAFR_0A06720 Kazachstania africana KAFR_0A06720 I 0.757
KLTH0G05104g Lachancea thermotolerans KLTH0G05104g I 0.757
KLTH0G05104g Kluyveromyces thermotolerans KLTH0G05104g I 0.757
KNAG_0B03350 Kazachstania naganishii KNAG_0B03350 I 0.757
Kpol_1023p63 Vanderwaltozyma polyspora Kpol_1023p63 I 0.757
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I 0.813
Kwal_18337 Kluyveromyces waltii Kwal_18337 I 0.757
NDAI_0C00690 Naumovozyma dairenensis NDAI_0C00690 I 0.757
PICST_66679 Scheffersomyces stipitis PICST_66679 I 0.827
SAKL0B05434g Lachancea kluyveri SAKL0B05434g N 0.763
SAKL0G06292g Lachancea kluyveri SAKL0G06292g I 0.757
SKUD_206715 Saccharomyces kudriavzevii SKUD_206715 I 0.757
SU7_1409 Saccharomyces arboricola SU7_1409 I 0.757
SU7_2774 Saccharomyces arboricola SU7_2774 I 0.757
TDEL_0A04530 Torulaspora delbrueckii TDEL_0A04530 I 0.757
TPHA_0K00210 Tetrapisispora phaffii TPHA_0K00210 I 0.757
YALI0_E24937g Yarrowia lipolytica YALI0_E24937g N 0.777
STP1 Saccharomyces cerevisiae YDR463W D 0.757