CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_chr_7.10133
(
Pichia stipitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_chr_7.10133
T138546_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CaO19.6121
M01036_2.00
Candida albicans
NCCCCTDDNN
NNHHAGGGGN
PBM
Siggers et al.(2014)
Mnl1_orf19.6121Calb
0.762
0.870
RO3G_07016
M01436_2.00
Rhizopus oryzae
NNCYCCYNN
NNRGGRGNN
PBM
Najafabadi et al.(2015a)
pTH10224
0.760
0.630
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_7.10133
C2H2 ZF
928
951
YLCNYCSRRFKRQEHLKRHFRSLH
estExt_fgenesh1_pg.C_chr_7.10133
C2H2 ZF
957
979
YDCTICNKKFSRSDNLNQHLKIH
Links
Other
C2H2 ZF
family TFs
Other
Pichia stipitis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_68294
Scheffersomyces stipitis
PICST_68294
I
0.827
DEHA2E03828g
Debaryomyces hansenii
DEHA2E03828g
I
0.822
G210_4804
Candida maltosa
G210_4804
I
0.816
GNLVRS01_PISO0K16554g
Millerozyma farinosa
GNLVRS01_PISO0K16554g
I
0.812
GNLVRS01_PISO0L16555g
Millerozyma farinosa
GNLVRS01_PISO0L16555g
I
0.812
PGUG_03478
Meyerozyma guilliermondii
PGUG_03478
N
0.793
PGUG_03478
Candida guilliermondii
PGUG_03478
N
0.793
SPAPADRAFT_59332
Spathaspora passalidarum
SPAPADRAFT_59332
I
0.792
KLTH0E06688g
Lachancea thermotolerans
KLTH0E06688g
I
0.777
KLTH0E06688g
Kluyveromyces thermotolerans
KLTH0E06688g
I
0.777
Kwal_17241
Kluyveromyces waltii
Kwal_17241
I
0.777
CPAG_00149
Candida parapsilosis
CPAG_00149
I
0.767
CORT_0D04470
Candida orthopsilosis
CORT_0D04470
I
0.767
TBLA_0F00370
Tetrapisispora blattae
TBLA_0F00370
N
0.764
CaO19.6121
Candida albicans
CaO19.6121
D
0.762
CD36_33070
Candida dubliniensis
CD36_33070
I
0.762
CTRG_03074
Candida tropicalis
CTRG_03074
I
0.762
CaO19.13540
Candida albicans
CaO19.13540
I
0.762
RO3G_07016
Rhizopus oryzae
RO3G_07016
D
0.760
ZYRO0G19140g
Zygosaccharomyces rouxii
ZYRO0G19140g
I
0.759
KAFR_0B02160
Kazachstania africana
KAFR_0B02160
I
0.759
AGOS_ACL057W
Ashbya gossypii
AGOS_ACL057W
I
0.759
AACERI_AaceriACL057W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriACL057W
I
0.759
KNAG_0D02120
Kazachstania naganishii
KNAG_0D02120
I
0.758