estExt_fgenesh1_pg.C_chr_7.10133 (Pichia stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_chr_7.10133 T138546_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CaO19.6121
M01036_2.00
Candida albicans
NCCCCTDDNN

NNHHAGGGGN
PBM
Siggers et al.(2014)
Mnl1_orf19.6121Calb
0.762 0.870
RO3G_07016
M01436_2.00
Rhizopus oryzae
NNCYCCYNN

NNRGGRGNN
PBM
Najafabadi et al.(2015a)
pTH10224
0.760 0.630
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_7.10133 C2H2 ZF 928 951
estExt_fgenesh1_pg.C_chr_7.10133 C2H2 ZF 957 979

Links

Other C2H2 ZF family TFs
Other Pichia stipitis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I 0.759
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I 0.759
CaO19.13540 Candida albicans CaO19.13540 I 0.762
CaO19.6121 Candida albicans CaO19.6121 D 0.762
CD36_33070 Candida dubliniensis CD36_33070 I 0.762
CORT_0D04470 Candida orthopsilosis CORT_0D04470 I 0.767
CPAG_00149 Candida parapsilosis CPAG_00149 I 0.767
CTRG_03074 Candida tropicalis CTRG_03074 I 0.762
DEHA2E03828g Debaryomyces hansenii DEHA2E03828g I 0.822
G210_4804 Candida maltosa G210_4804 I 0.816
GNLVRS01_PISO0K16554g Millerozyma farinosa GNLVRS01_PISO0K16554g I 0.812
GNLVRS01_PISO0L16555g Millerozyma farinosa GNLVRS01_PISO0L16555g I 0.812
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I 0.759
KLTH0E06688g Kluyveromyces thermotolerans KLTH0E06688g I 0.777
KLTH0E06688g Lachancea thermotolerans KLTH0E06688g I 0.777
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I 0.758
Kwal_17241 Kluyveromyces waltii Kwal_17241 I 0.777
PGUG_03478 Meyerozyma guilliermondii PGUG_03478 N 0.793
PGUG_03478 Candida guilliermondii PGUG_03478 N 0.793
PICST_68294 Scheffersomyces stipitis PICST_68294 I 0.827
RO3G_07016 Rhizopus oryzae RO3G_07016 D 0.760
SPAPADRAFT_59332 Spathaspora passalidarum SPAPADRAFT_59332 I 0.792
TBLA_0F00370 Tetrapisispora blattae TBLA_0F00370 N 0.764
ZYRO0G19140g Zygosaccharomyces rouxii ZYRO0G19140g I 0.759