CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_chr_7.10133
(
Pichia stipitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_chr_7.10133
T138546_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CaO19.6121
M01036_2.00
Candida albicans
NCCCCTDDNN
NNHHAGGGGN
PBM
Siggers et al.(2014)
Mnl1_orf19.6121Calb
0.762
0.870
RO3G_07016
M01436_2.00
Rhizopus oryzae
NNCYCCYNN
NNRGGRGNN
PBM
Najafabadi et al.(2015a)
pTH10224
0.760
0.630
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_7.10133
C2H2 ZF
928
951
YLCNYCSRRFKRQEHLKRHFRSLH
estExt_fgenesh1_pg.C_chr_7.10133
C2H2 ZF
957
979
YDCTICNKKFSRSDNLNQHLKIH
Links
Other
C2H2 ZF
family TFs
Other
Pichia stipitis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy