estExt_fgenesh1_pg.C_chr_7.10133 (Pichia stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_chr_7.10133 T138546_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CaO19.6121
M01036_2.00 		Candida albicans
NCCCCTDDNN
NNHHAGGGGN		 PBM
Siggers et al.(2014)
Mnl1_orf19.6121Calb 		0.762 0.870
RO3G_07016
M01436_2.00 		Rhizopus oryzae
NNCYCCYNN
NNRGGRGNN		 PBM
Najafabadi et al.(2015a)
pTH10224 		0.760 0.630
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_7.10133 C2H2 ZF 928 951
estExt_fgenesh1_pg.C_chr_7.10133 C2H2 ZF 957 979

Links

Other C2H2 ZF family TFs
Other Pichia stipitis TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action