estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 T138547_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01629
M01191_2.00 		Neurospora crassa
TRYGSCRC
GYGSCRYA		 PBM
Lambert et al.(2019)
pTH9692 		0.777 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 C2H2 ZF 278 302
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 C2H2 ZF 310 335
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 C2H2 ZF 341 362

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action