estExt_fgenesh1_pg.C_sca_1_chr1_3_00031 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_sca_1_chr1_3_00031 T138549_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02666
M01875_2.00 		Neurospora crassa
NNNMGCCACN
NGTGGCKNNN		 PBM
Weirauch et al.(2014)
pTH8838 		0.804 0.926
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_sca_1_chr1_3_00031 C2H2 ZF 259 281
estExt_fgenesh1_pg.C_sca_1_chr1_3_00031 C2H2 ZF 287 309
estExt_fgenesh1_pg.C_sca_1_chr1_3_00031 C2H2 ZF 315 336

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action