estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 T138552_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN

NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.792 0.913
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB

VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.787 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 110 132
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 138 162
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 168 190
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 196 220

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action