CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_130086
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pm.C_130086
T138556_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_130086
C2H2 ZF
568
593
YSCTYHGCSQRFETPQKLQKHKREGH
estExt_fgenesh1_pm.C_130086
C2H2 ZF
630
648
CNTVFSRPYDLTRHEDTIH
estExt_fgenesh1_pm.C_130086
C2H2 ZF
655
680
VRCALCVEEKTFSRNDALTRHMRVVH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRG_04426
Pyrenophora triticirepentis
PTRG_04426
N
0.827
PTT_10773
Pyrenophora teres
PTT_10773
N
0.827
SETTUDRAFT_100153
Setosphaeria turcica
SETTUDRAFT_100153
N
0.827
SNOG_05430
Phaeosphaeria nodorum
SNOG_05430
N
0.827
SNOG_05430
Stagonospora nodorum
SNOG_05430
N
0.827
LEMA_P045200.1
Leptosphaeria maculans
LEMA_P045200.1
N
0.827
COCCADRAFT_6612
Bipolaris zeicola
COCCADRAFT_6612
N
0.827
COCC4DRAFT_144316
Bipolaris maydis
COCC4DRAFT_144316
N
0.827
COCVIDRAFT_28755
Bipolaris victoriae
COCVIDRAFT_28755
N
0.827
COCMIDRAFT_25193
Bipolaris oryzae
COCMIDRAFT_25193
N
0.827
COCSADRAFT_248227
Bipolaris sorokiniana
COCSADRAFT_248227
N
0.827
UCRNP2_9742
Neofusicoccum parvum
UCRNP2_9742
N
0.804
MPH_01081
Macrophomina phaseolina
MPH_01081
N
0.804