estExt_fgenesh1_pm.C_sca_1_chr1_3_00042 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pm.C_sca_1_chr1_3_00042 T138564_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
csp-1
M01876_2.00 		Neurospora crassa
NNDWCCCYDN
NHRGGGWHNN		 PBM
Weirauch et al.(2014)
pTH9015 		0.798 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042 C2H2 ZF 133 160
estExt_fgenesh1_pm.C_sca_1_chr1_3_00042 C2H2 ZF 166 190

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action