estExt_fgenesh2_kg.C_190001 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_kg.C_190001 T138566_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH

DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.780 0.858
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH

DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.759 0.805
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY

RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.759 0.805
wor
M06051_2.00
Drosophila melanogaster
CACCTGY

RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.759 0.805
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY

RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.759 0.805
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_190001 C2H2 ZF 112 134
estExt_fgenesh2_kg.C_190001 C2H2 ZF 143 165
estExt_fgenesh2_kg.C_190001 C2H2 ZF 169 191
estExt_fgenesh2_kg.C_190001 C2H2 ZF 197 219
estExt_fgenesh2_kg.C_190001 C2H2 ZF 225 245

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action