CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_110259
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_110259
T138580_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_110259
C2H2 ZF
18
40
HRCYHCKYSAPYKSQLTRHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
46
68
FKCDQCDYSAALKGSLINHMRQH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
74
96
YKCDQCDYSAAQKGNLDNHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
102
125
FKCGQCDYSAAHQSSLDYHIMSKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
148
170
HRCHHCKYSAPYKSQLTRHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
176
198
FKCDQCDYSAALKGSLINHMRQH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
204
226
YKCDQCDYSAAQKGNLDNHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
232
255
FKCGQCDYSAAHQSSLDYHIMSKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
261
283
YKCNQCDFSTAQKGNLDLHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
289
311
YKCDQCDYSAAQKGHLDHHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
317
339
FKCDQCDYSAAQKCNLDQHMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
345
368
YKCDLCDYSAAKKGSLDHHIMRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
566
588
YTCDQCDYSAARKDSLDRHIAKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
594
616
YICGECGHRTAHRSDLTKHMRIH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
622
644
YKCDKCDYSSVRKCDLDKHKSKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
664
686
LICIECDYRTTSKRDLVRHARTH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
692
714
YKCDQCDFSAARKDHLNRHMFQH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
720
742
YMCGDCDYRTVRKSDLATHMAIH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
748
770
YKCGKCDYSSVRKNALNKHLSIH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
789
811
FACEKCDFKASAKKDLSRHTRTH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
817
839
HKCDQCDYSAAHEFYLKLHMAKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
845
868
YLCDECEFRTAHRSALAKHKRIKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
874
896
YKCDQCNYTAPRKSYLDQHKLRH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
902
924
HLCWECGYRTSNRSGLNKHMRTH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
930
952
YKCDQCSYCAAQKGKLDRHKLTH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
958
980
YMCEECGFRTAHRATLTIHKRKH
estExt_fgenesh2_pg.C_110259
C2H2 ZF
986
1008
YKCDQCDYSTRAKNNLNKHMVRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found