CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1510098
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1510098
T138618_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
10
32
YICAECGYQAAFKSRLSRHAKIH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
66
88
YMCGECGFRIGHRAALSSHMKMH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
94
116
YKCDQCDYCTVRKSALDGHKVKH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
122
144
YMCGECGFRTGHRSSLSCHMKLH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
150
172
YKCDQCDFCTAWKSDLDRHKVKH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
178
200
YTCGECGFRTGHRSALSRHMKIH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
206
228
YKCDQCDFCTVEKLALNRHKVTH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
234
256
YMCGECGYRTHHKSTLASHMKIH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
262
284
YKCGECGYRTAFKSALSSHMKRH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
339
361
HKCDQCEYWTARKGQLEQHMTVH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
367
389
YMCDRCGFCTAWKGHLDRHLAKH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
395
417
YKCDQCDFCTARKEQLDLHIAEH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
423
445
YTCEYCGFLTAIRAHLLSHMKKH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
451
474
YKCDQCDYCTAWKANLNKHMAIKH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
480
502
YTCEECGFRTAYRVSLSRHMKTH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
508
531
YKCALCDYCTAQKQDFNVHMTTKH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
537
559
YMCGECGFRTAYKSNLSSHMKIH
estExt_fgenesh2_pg.C_1510098
C2H2 ZF
563
585
YKCDRCDYCTARKQDLERHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found