CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_18660001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_18660001
T138646_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
245
266
HCPQCDYTSLDSSNFRNHVLRH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
272
294
FKCSHCDYAARTKHILRKHMVIH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
300
322
FSCKSCDFKTAHKNSLRTHMKTH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
328
352
YMCEVCGHRSAQAGALRIHILTLHH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
356
378
IKCRICGYVAKKASHLQAHMKTH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
382
406
HRCDFEGCNFTTTMQQKLQEHQKVH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
412
434
FACNQCTFQSHNKYSLIDHMKTH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
440
463
HACDQCDYRSVASYELFKHKRTNH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
468
490
WPCDVCGRQCCSEALLERHKERH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
499
521
YVCKECNYRTFDFKTLKEHMRVH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
527
550
YACDKCDYRAAVQYNLRSHMARKH
estExt_fgenesh2_pg.C_18660001
C2H2 ZF
556
579
FKCPHCNHCTKTKDDLKSHIKNRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found