CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1970080
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1970080
T138652_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1970080
C2H2 ZF
22
46
YVCTVQGCGKRFTEYSSLYKHHVVH
estExt_fgenesh2_pg.C_1970080
C2H2 ZF
52
75
YICNHCGKNYRQTSTLAMHKRTAH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSBTAG00000016074
Bos taurus
ENSBTAG00000016074
N
0.774
ENSTGUG00000015035
Taeniopygia guttata
ENSTGUG00000015035
N
0.774
Brh_R007876
Buceros rhinoceros
Brh_R007876
N
0.764
Aan_R003807
Calypte anna
Aan_R003807
N
0.758