CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2100027
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2100027
T138660_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
462
485
FKCEECDYVTDTRSKLKGHWYYWH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
495
518
HKCKDCDFASASLSDLRQHMYYEH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
560
584
YKCKRKQCNFTTPYKAALNEHKKKH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
590
612
FICRKCGKRFDTRSHLKTHKDTH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
618
641
YKCDKCGYSAAYKNVLEKHILRHH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
647
669
FMCEYCGFRTFHSWNFTNHQKLH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
675
698
FKCKQCDYSAVVKRDLHKHIQVHH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
704
727
HKCTLCGYRAAHKRGLAAHMRSNH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
735
757
YACTQCDYITEHRIHLTAHMRKH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
763
785
FVCRLCDFRTAYRDSMRQHVQTH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
791
814
FKCKLCDYRAARSTWITSHMIGQH
estExt_fgenesh2_pg.C_2100027
C2H2 ZF
820
843
FACPMCTHRAKYKCNIVSHMKSVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found