CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2500024
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2500024
T138676_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
13
32
QECGTQVSRLCDLKVHMRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
38
60
YKCEQCSKCFSQSINFKVHMRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
66
88
YRCEKCSKQFTTLSNLKCHLRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
94
116
YKCETCYNHFRELGTLKKHMRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
118
138
GSYCDKEFPFKSNLNVHLRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
144
166
YQCNACGKRFSHVCNLNCHMRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
172
194
QRCQECSRQFSRLSALKVHLRTH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
200
222
YKCEHCNKGFIHSGDLRTHIRIH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
228
250
YKCEECSKQFSTLSDLKNHMRIH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
256
278
YSCAECSKQFKQLGHLKTHMRIH
estExt_fgenesh2_pg.C_2500024
C2H2 ZF
284
306
YMCEECSKQFTTVSNLKRHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found