CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2710008
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2710008
T138685_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
84
106
YKCEQCDYSAKLKHHLDRHVLKH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
112
134
FKCDQCDYSAKLKHNLDRHVLKH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
140
162
FKCDQCGYSAIRKSSLDNHLATH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
174
196
YKCEQCDYSAPHKSGLHRHVLTH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
202
224
FSCDQCGYSTAQKCNLDKHLATH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
230
252
FKCEQCDYSAKQKHHLTRHLLIH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
258
280
FSCDHCDYTAARKSNLDQHLATH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
289
311
YKCEQCYYSATQKHHLERHVLKH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
317
339
FTCDQCDYSAARKSQLDAHLAKH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
345
367
YSCGECEYRTTQKYLLTRHMRIH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
401
423
FLCEECGYRTRHRFALSQHLRSH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
429
451
YKCDQCDYSVGDKGSLDRHLAKH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
457
479
FLCEQCGYRAAKKADLSKHMRRH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
485
507
HKCDQCDYSAATKSSLIRHNKKH
estExt_fgenesh2_pg.C_2710008
C2H2 ZF
513
535
YACEECGYRAVAMGDMSRHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found