CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_340182
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_340182
T138699_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_340182
C2H2 ZF
75
97
YRCGECGYRSVQKSDLTKHMRIH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
113
135
YMCGECGFRTTHKESLFRHMRTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
141
164
YKCDQCDYSAARKSTLDNHTVAKH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
170
192
YMCGECGYRTVEKSTLSRHMRIH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
198
220
YKCDQCDYSATEKSSLVKHIRKH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
226
248
YMCGECGFRTAMKCNLSVHIRSH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
254
276
YKCDQCEYSAAHKSTLDQHLEKH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
282
304
FMCGECGYRAAQWQHLYRHMRTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
310
332
YKCEQCDYSAAQKGHLDRHLMKH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
338
360
FMCDECGYRTARKSTLIRHMRSH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
366
388
HKCDQCDFSAAQKHHLINHQTRH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
562
584
FVCGECGYRAAYRSHISQHMRTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
590
612
YKCDQCGYRTAWKSHLSQHMRTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
618
640
YKCDQCDYSAAQKSTLDQHVIKH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
646
668
YNCEMCGYRTAKKSHLSRHMRTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
674
696
FKCDQCDYSAAHKSTLDEHVTTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
702
724
YMCGECGFRATRKSELSRHMRTH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
730
752
YKCDQCDYSAARKCTLDEHLTKH
estExt_fgenesh2_pg.C_340182
C2H2 ZF
759
780
MCGECGYRTTRKSNLSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found