CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_5320004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_5320004
T138727_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
38
61
FQCEQCDFSSLRIWHLTQHIRVKH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
67
90
FMCDQCDYSTGNKYALKKHIKVTH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
105
127
YTCTYCDFSTARKRCLVNHVNSH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
133
155
YKCELCAYSAYQRQHLVRHMTKH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
161
183
HKCEICGYSTSQASYLKTHMARH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
189
212
YKCKLCDYSATLKSGLTRHMMSIH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
218
240
YNCDTCGFATGRLSNLKRHLATH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
246
268
YKCTVCDYAASWPDDLNRHMVVH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
274
296
YKCELCDYSAARIQHLKQHIARH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
302
324
YKCELCDYSGLMLVDLKQHMVVH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
330
352
YKCELCDYSGARKSDVKIHMKTH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
358
380
HKCPFCDYAAAHASQLTQHVRIH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
386
409
HKCDFCDYRTLRKTHLRRHIQAKH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
415
438
HKCDICDYSTAIKSCLKEHMDNMH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
445
467
FHCELCDYSSRRLFHLKQHISTH
estExt_fgenesh2_pg.C_5320004
C2H2 ZF
473
496
YKCEECGYAATQMTHLKRHITVTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found