CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_5740033
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_5740033
T138734_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
55
77
YLCGDCGYRTAHKANLSKHTRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
83
106
YKCDQCDYSATQKSHLELHMAAKH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
112
134
YMCGECGYRTAIKFTLARHMRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
140
162
YKCDLCDFAAAEKGNLVTHQATH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
168
190
YMCGECGYRTTQKSTLSSHMRIH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
196
219
YKCDQCDYSVSRKSYLEHHMATKH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
225
247
CMCGECGYRAAKKSALSVHMTTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
253
276
YHCNQCEFSTAWKSGLKRHMTDKH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
282
304
YKCEECGFSTTRKSTLYQHIRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
310
332
YKCDQCDFSAAVKVNLVTHQTTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
338
360
YLCGECGYRAAQRSTLSKHMRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
424
446
FMCGECGYRTAHRSNLSRHMRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
452
475
YKCDQCEYSTIRKSQLGCHIATKH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
481
503
YMCGECGYRTVEKSKLSVHMRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
509
531
YKCDQCNYSAAKKYTLVTHQATH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
537
559
YMCGECGYRAAQRSSLSQHMRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
565
587
YKCGECGFRAALKSDLARHMRTH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
593
616
YKCDQCDYSATQKYSVDIHKAAIH
estExt_fgenesh2_pg.C_5740033
C2H2 ZF
622
644
YMCGECGYRATQRSTLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found