CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_890004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_890004
T138757_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_890004
C2H2 ZF
65
87
YMCGECGYRTANTSHLSRHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
121
143
YKCGECGYRTALRLDLARHTRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
149
171
YRCDQCDYATARKASLDDHMTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
177
199
YMCGECGYRAVRKSYLSIHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
205
227
HMCRECGYRTAYKSDLSRHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
233
255
YKCDLCDYSASRTSTLNKHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
261
283
YMCGVCGYRAARKDTLSGHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
289
311
YKCDQCDYSARHKSSFDIHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
512
534
YMCGVCGYRTTQKSDLSEHVNTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
537
559
FKCDQCDFSAADRYTFIRHLRKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
566
588
YMCGECGFRAEHKSDLSIHMRIH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
594
617
YKCDQCNYSAARKSNLQQHLAAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
623
645
YMCGECGYRAARKSTLSEHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
765
787
YMCEECGYRADRKSTLSRHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
793
815
YKCDQCDYSAAQKYSLDIHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
821
843
YQCDQCDYSTARKCDLDKHVTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
849
871
YMCGECGYRATWKSALLQHIRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
877
899
YKCEECNFSAAQKSTLRQHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
905
927
YMCGECGYRAAQKSHLSRHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
933
955
FKCDQCDFSAAQKSSLDYHLTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
961
983
YMCGECGYRTTYKSDLSKHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
989
1011
YKCDQCDYTTVIKSNLNKHLARH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1017
1039
YMCGECGYRTTEKSTLSKHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1045
1067
YKCDQCDYSAVQKSTLDLHLTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1073
1095
YLCGECWYKTAKKSHLSVHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1129
1151
YMCGECGYRATHKFDLSIHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1157
1179
YKCDQCDYSAAVKSSLNKHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1185
1207
YMCGECGYRTVQVSTLFEHTQTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1242
1265
YMCGECGYRAAEYSELSQHILRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1273
1295
YKCDQCDYSATQKNHLDIHLLKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1301
1324
YICGECGYRAAQKSTLDWHIVAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1330
1352
YMCGECGYRAAQKSHLAVHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1358
1380
FKCDQCDYSAVRKSTLNIHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1386
1408
YMCGECGYKAARKFDLCRHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1414
1436
YNCDQCDYSAAQKSTLDGHMTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1658
1680
YMCGECGYRTAKKCHLSQHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1686
1708
YKCDQCDYSAARKSHLDIHLLKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1714
1736
YMCGECGFRAAHKSHLSKHMRIH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1742
1764
YKCDQCDYATARKSNLDRHRTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1770
1792
YMCGECGYRTARKFNLSLHVRIH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1798
1820
YKCDQCDYSAVQKSSLDIHLAKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1826
1848
YKCDQCDYSAAQKCALVRHLTKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1854
1876
YMCEECGYRTALKSTLSKHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1965
1987
YMCGECGYRAARKFTLSVHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
1993
2015
YKCDQCDYSAAQKSSLDSHLMKH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2021
2043
YMCGECGYRTGWKSRLSKHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2049
2071
YKCGECGYRTAVKSALSIHVRIH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2077
2100
YKCDQCDYSAANKSTLKNHLAARH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2106
2128
YMCGECGYRTYQSSNLSRHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2134
2156
YKCDQCDYSAAHKYSLDIHLANH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2162
2184
YMCRECGYRTAHKSDLTKHVRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2190
2212
YMCGECGFRTAKKSNISQHMRTH
estExt_fgenesh2_pg.C_890004
C2H2 ZF
2218
2240
YKCDQCDYSAAQKSHLDIHVTKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found