CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pm.C_290022
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_290022
T138777_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_290022
C2H2 ZF
1
22
MCGECGYRASNKTRLVEHMRTH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
28
50
FKCNQCHYQASYKSLLVKHMKKH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
56
78
YCCDICEYKTYNWSHIKRHMKYH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
84
106
YKCEQCEYSAVDKSDLTKHRRRH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
153
175
YVCNSCGFTTSYAHKFSKHRQRH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
181
203
FICGECGYRASYKSRLVYHMRTH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
209
231
FKCNQCHYQASLKGSLVEHMKKH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
237
259
YSCELCDYQTLRKYHFERHMKYH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
265
287
YKCEECDYRTVDKDSLIRHMRCH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
293
320
YSCNECDYKASLKATLLRHALVRHRRQH
estExt_fgenesh2_pm.C_290022
C2H2 ZF
326
346
YVCQVCGFQTNDSSSLARHVG
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found