CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_4490006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_4490006
T138784_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
10
32
YMCGECSYRTADRSNLSVHMRTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
38
60
YKCEQCDFSTAFKVNLDRHIAKH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
66
88
YMCGECGYRAADRFALTRHMRTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
94
116
YKCDQCDYSAARKESLEQHMIKH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
122
144
YMCGQCGYSTADRSNLYYHMRTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
150
172
YKCDHCDYSAIRKTYLDQHMATH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
178
200
LVCGECGYRTADRSALTRHMRTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
206
228
YKCVQCAYSAATKTNLDRHMTKH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
234
256
YTCEECGYRTAYRSALTRHMKTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
277
299
YKCNQCKYSAAQKCTLDRHMATH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
305
327
FMCGECGYGTTNRFNLSMHVRKH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
333
356
YKCDQCDYSAARKVHLDGHMTSKH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
362
384
YMCGECGYRTANRASLTVHMRTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
390
412
YKCDQCEYSTGRKSNLNRHMANH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
418
440
FMCGECGYRTANRYDLSRHMRTH
estExt_fgenesh2_pm.C_4490006
C2H2 ZF
446
468
YKCDQCDYSAAHKVSLDHHITKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found