CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_7050004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_7050004
T138786_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
26
48
HKCGECGKEFRQLYDLKRHMRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
54
76
FRCEECSRQFSELSNLKQHMRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
82
104
YKCDKCSKQFSDHGHLKRHLKTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
110
132
FKCEECSKQFSELFTLKSHMRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
138
160
YKCEECGKQFSQLSHLKRHMRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
166
188
YKCEECSKQFSELSHLKTHMRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
194
216
YKCNECGKQFSELGHLKKHLRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
222
244
YKCEECGKQFSELRNLKSHMRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
250
272
YKCDECSKQFSVLCSLKRHKRTH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
278
300
YRCEKCSRQFCDMGNLKSHMRIH
estExt_fgenesh2_pm.C_7050004
C2H2 ZF
306
328
YRCTECNRSFRTSSVLRKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found