CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_8040003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_8040003
T138787_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
27
49
FMCGECGYRASDRTRLVDHIRTH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
55
77
FKCNQCHYQASLKSSLVKHMKRH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
83
104
YRCELCEYKTYRGAHIERHMKY
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
111
133
YKCEECGYRTADKGNLTKHMRCH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
139
162
YSCQECDYKASQRSSLVWHMRTKH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
177
199
FMCGECGYRASDRTRLVDHVRTH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
205
227
FKCNQCHYQASIKSSLVKHMKKH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
233
255
YRCELCEYKTYRGAHIERHMKYH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
261
283
YKCEECGYRTADKGNLTKHMRCH
estExt_fgenesh2_pm.C_8040003
C2H2 ZF
289
312
YSCQECDYKASQRSSLVWHMRTKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found