CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_kg.C_10150
(
Neurospora discreta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh3_kg.C_10150
T138791_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.827
1.000
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.822
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_kg.C_10150
C2H2 ZF
245
266
QRCPHPECGKTFKDLKAHMLTH
estExt_fgenesh3_kg.C_10150
C2H2 ZF
273
299
KCPIATCEYHVKGFARKYDKNRHTLTH
estExt_fgenesh3_kg.C_10150
C2H2 ZF
304
334
MVCGFCPGSGSAAEKSFNRADVFKRHLTAVH
estExt_fgenesh3_kg.C_10150
C2H2 ZF
370
389
KCSTCSQTFSNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Neurospora discreta
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy