estExt_Genewise1.C_110425 (Cochliobolus heterostrophus C5)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_Genewise1.C_110425 T138840_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.812 0.946
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.807 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_110425 C2H2 ZF 63 85
estExt_Genewise1.C_110425 C2H2 ZF 91 115
estExt_Genewise1.C_110425 C2H2 ZF 121 143
estExt_Genewise1.C_110425 C2H2 ZF 149 173

Links

Other C2H2 ZF family TFs
Other Cochliobolus heterostrophus C5 TFs

Invalid Input OrderBy

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action